个人简介
孙楠，2019年毕业于大连理工大学数学系，2024年在清华大学数学系获得博士学位。博士毕业后，在清华大学丘成桐数学科学中心和北京雁栖湖应用数学研究院从事博士后研究。2026年8月起任职河套数学与交叉学科研究院（深圳）助理教授。主要研究方向为生物信息学、机器学习和应用数学，在The Innovation, Computational and Structural Biotechnology Journal, BMC Bioinformatics等期刊发表多篇论文，参与多项国家自然科学基金及北京市自然科学基金项目，主持中国博士后科学基金第78批面上资助。
研究兴趣
l 生物医学数据建模分析
教育经历
l 2019 - 2024 清华大学 应用数学 理学博士
l 2015 - 2019 大连理工大学 信息与计算科学 理学学士
工作经历
l 2024 - 2026 清华大学丘成桐数学科学中心、北京雁栖湖应用数学研究院 博士后
出版物
l Nan Sun, Yu Wang, Xiang Shi, Dengcheng Yang, Rongling Wu##, and Stephen S.-T. Yau#. scMFF: A Machine Learning Framework with Multiple Features Fusion Strategies for Cell Type Identification. BMC Bioinformatics (2025): 277.
l Nan Sun, Mengcen Guan, Piyu Zhou, Stephen S.-T. Yau#. scKSFD: federated distillation model with knowledge sharing for cell type classification with clinical transcriptome data. (Accepted by BMC Bioinformatics)
l Xiang Shi, Jiayi Kang, Nan Sun, Xin Zhao, and Stephen S.-T. Yau#, Multi-perspective Natural Vector: A Novel Method for Viral Sequence Feature Extraction, Journal of Computational Biology (2026): 255-266.
l Hongyu Yu*, Nan Sun*, Ruohan Ren*, Tao Zhou*, Mengcen Guan*, Leqi Zhao*, Stephen S.-T. Yau#. The Grand Biological Universe: A Comprehensive Geometric Construction of Genome Space. The Innovation (2025): 100937.
l Mengcen Guan*, Nan Sun*, and Stephen S-T. Yau#. Geometric analysis of SARS-CoV-2 variants. Gene (2024): 148291.
l Harris Song*, Nan Sun*, Wenping Yu, and Stephen S.-T. Yau#. A novel natural graph for efficient clustering of virus genome sequences. Current Bioinformatics (2023): 687-703.
l Meng Fang*, Jiawei Xu*, Nan Sun and Stephen S.-T. Yau#. Generating minimal models of H1N1 NS1 gene sequences using alignment-based and alignment-free algorithms. Genes (2023): 186.
l Nan Sun and Stephen S.-T. Yau#. In-depth investigation of the point mutation pattern of HIV-1. Frontiers in Cellular and Infection Microbiology (2022): 1033481.
l Nan Sun, Xin Zhao and Stephen S.-T. Yau#. An efficient numerical representation of genome sequence: natural vector with covariance component. PeerJ (2022): e13544.
l Nan Sun, Jie Yang and Stephen S.-T. Yau#. Identification of HIV rapid mutations using differences in nucleotide distribution over time. Genes (2022): 170.
l Nan Sun*, Shaojun Pei*, Lily He, Changchuan Yin, Rong Lucy He and Stephen S.-T. Yau#. Geometric construction of viral genome space and its applications. Computational and Structural Biotechnology Journal (2021): 4226-4234.
l Nan Sun*, Rui Dong*, Shaojun Pei, Changchuan Yin and Stephen S.-T. Yau#. A new method based on coding sequence density to cluster bacteria. Journal of Computational Biology (2020): 1688-1698.
发明专利
l 孙楠，丘成栋，余泓谕，王玉，周丕宇。基于动态分布适应和多源域特征加权的单细胞药物反应预测方法及装置，2026-05-29，CN122050533A。
l 孙楠，丘成栋，余泓谕，周丕宇，赵春阳，魏君陶。一种基于凸包几何约束的基因变异的类别预测方法及装置，2026-05-15，CN122050533B。
l 姚响芸，李欣，孙楠，崔立刚。一种超声图像中喉返神经及其相邻解剖结构的识别方法，2025-11-11，CN120451683B。
l 孙楠，姚响芸，李欣，丘成栋，宋洁博。一种基于静态超声图像向超声视频迁移建模的甲状腺滤泡性肿瘤分层识别方法，2026-05-15，CN122199938A。